TRANSP Grid Analysis 14577A20 ST40 trdat.log

==>runtrx_new start: date:  Wed Feb 4 03:04:53 PM EST 2026 ( flux-node15.local )
argv = 2
iarg = 2
cmd_opt  = pre
runtrx_new: tok.yy = ST40.25
==========(runtrx_new)======================
date:  Wed Feb 4 03:04:53 PM EST 2026 ( flux-node15.local )
args:  14577A20 pre
==========(runtrx_new)======================
==========(runtrx_new)======================
==========TRANSP preprocessing==========
date:  Wed Feb 4 03:04:53 PM EST 2026 ( flux-node15.local )
==========check for 14577A20_mdsmark.sh===
==========(runtrx_new)======================
==========TRDAT execution===============
date:  Wed Feb 4 03:04:53 PM EST 2026 ( flux-node15.local )
    TRDAT 
  TRANSP Version: 21.X
  TRANSP DOI: 10.11578/dc.20180627.4
  Build Date: 2021/--/--

  %trmpi_init.f90: LOG_LEVEL env. var.: 1
  %trmpi_init.f90: logfile_level: warn
  CTOKNM : Cdir = /scratch/shared/kaye/transp_compute/ST40/14577A20/
 % DIRECTORY IS /scratch/shared/kaye/transp_compute/ST40/14577A20/; TOKAMAK ID SET TO ST40
 %trmpi_openlog: LOGFILE_LEVEL = warn
     %NLIST: open namelist file14577A20TR.ZDA              
 %trcom_static_box: loading static data
 %mds_setup:  setting MDSplus server to:  TRANSPGRID.PPPL.GOV
 %mds_setup:  server set OK.
 %mds_setup:  MDSplus opening tree:  TRANSP_ST40  145770120
 %mds_setup:  MDSplus tree open status:  265389633
  -----------> entering UF0GET.
 %UF0DRD:  DIMENSIONALITY OF INPUT FILE = 3
  UF0GET: -> Btor is counter-clockwise from BTOR_CCW scalar in MMX data.
  UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in MMX data.
  UF0GET: MMX max exponent:            2
  %UF0GET -- finished.
  
  %DATCHK: full equilibrium input 
 DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC
  %TIME DEPENDENT FAST ION ANOM. DIFFUSION CONTROLS DETECTED!
  %ENERGY DEPENDENT FAST ION ANOM. DIFFUSION CONTROLS DETECTED!
 %DATCHK -- VALUE OF FRAC TOO SMALL, RESET.
  %DATCHK: NYXINV incremented to be odd:         101         161
  %DATCHK: no ECH/ECCD, NLECH=F,
  %DATCHK: no Lower Hybrid, NLLH=F
  TIDXSW defaulted: value of 0.05 assigned.
  %DATCKA: ACfile times pre-screen... 
 %DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O
  GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG"
 %ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY.
  dummy trdatusub vsn trgdat_check called (OK).
  dummy trdatusub vsn trgdat_psload called (OK).
  *UTRCHK:  CHECKING TRDAT NAMELIST SPECIFICATIONS.
  %UTRCHK: full equilibrium input 
 %UTRCHK -- SURFACE VOLTAGE DATA SHOULD BE PROVIDED
  WHEN USING BP/BT OR MHD OR Q INPUT DATA TO CONTROL THE
  EVOLUTION OF THE CURRENT PROFILE -- THIS IS NEEDED
  TO COMPLETE EVALUATION OF RESISTIVITY AND OHMIC HEATING

 *DDEFIN:  SET UP PHYSICS DATA FOR ANALYSIS:
  TIME RANGE IS TINIT= 6.0000E-04, FTIME= 1.4000E-01 SECONDS.

 SETSCD - SET SCALAR DATA FOR UPF
 SETTIM - SET UP TIMING INFORMATION FOR UPF

 *UF1GET:  PROCESSING "CUR":  plasma current amps    -------------------
 %CHKTIM:  DATA TIME RANGE  5.0072E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).

 *UF1GET:  PROCESSING "RBZ":  [ext. B field] * R Tesla*cm    -----------
 %CHKTIM:  DATA TIME RANGE  5.0072E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETDFLT:  "GAS" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, GASFLN =  0.0000E+00

 *UF1GET:  PROCESSING "PLF":  Poloidal flux Wb/rad    ------------------
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).

 *UF1GET:  PROCESSING "TRF":  Toroidal flux Webers    ------------------
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETDFLT:  "VSF" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, VSURI =  1.0000E+00

 *UF3GET:  PROCESSING "MMX":  Equilibrium moments cm    ----------------
 %FIXUNS:  CONVERTING UFILE DATA UNITS, M         , TO cm        
          >CONVERSION FACTOR:  * 100.000    
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).

 %Geteq: MMX file does not cover time range of run;
          equilibrium geometry will be extrapolated
          flat to fill the time range

  ---> Geteq: #moments NMOM =           16
 Geteq: Interpolate equilibrium data for UPF
 SETLIM - SET UP Axisymmetric limiter data for UPF

 *UF1GET:  PROCESSING "LIM":  Axisymmetric Limiter cm    ---------------
 %UF1GET:  X axis is not the timebase, processing axis units cm
 %FIXUNS:  CONVERTING UFILE LIM TIMEBASE UNITS, M         , TO cm        
          >CONVERSION FACTOR:  * 100.000    
 %FIXUNS:  CONVERTING UFILE LIM DATA UNITS, M         , TO cm        
          >CONVERSION FACTOR:  * 100.000    

 *UF2GET:  PROCESSING "GRB":  MHD g (R*Bt) profile Tesla*cm    ---------
 %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP:
  1ST DIMENSION = "          "; 2ND DIMENSION = "seconds   "
 %FIXUNS:  CONVERTING UFILE GRB DATA UNITS, TESLA*M   , TO Tesla*cm  
          >CONVERSION FACTOR:  * 100.000    
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETDAT2-- X axis is normalized flux, not modified, npts= 41

 *UF2GET:  PROCESSING "NER":  electron density n/cm**3    --------------
 _%UF2GET FALLBACK:  1D UFILE INPUT => TIME INVARIANT PROFILE
 %CKSETRD:  NRINER=3 DATA:  PLASMA COVERAGE CHECK:
  GREATEST LOWER BOUND (*) (R-R0)/A =  1.6961E+00
  LEAST UPPER BOUND (*)    (R-R0)/A = -1.1710E+00
 *EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A = 
  -9.0000E-01 TO  9.0000E-01 AT ALL TIMES IN THE ANALYSIS.
 *REQUIREMENT RELAXED BY NAMELIST:  XRCNER= 1.000E+00 RMJCHK=-1.000E+00
 %SETRD0:  X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA

 *UF2GET:  PROCESSING "OMG":  plasma rotation rad/sec    ---------------
 _%UF2GET FALLBACK:  1D UFILE INPUT => TIME INVARIANT PROFILE
 %SETDAT2-- X axis is normalized flux, not modified, npts= 65

 *UF2GET:  PROCESSING "PRS":  MHD Pressure profile Pascals    ----------
 %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP:
  1ST DIMENSION = "          "; 2ND DIMENSION = "seconds   "
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETDAT2-- X axis is normalized flux, not modified, npts= 41

 *UF2GET:  PROCESSING "QPR":  q profile      ---------------------------
 %UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP:
  1ST DIMENSION = "          "; 2ND DIMENSION = "seconds   "
 %CHKTIM:  DATA TIME RANGE  7.1817E-03 TO  1.8876E-01 SECONDS
          DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
 %SETDAT2-- X axis is normalized flux, not modified, npts= 41

 *UF2GET:  PROCESSING "TER":  electron temperature eV    ---------------
 _%UF2GET FALLBACK:  1D UFILE INPUT => TIME INVARIANT PROFILE
 %SETRD0:  X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA

 *UF2GET:  PROCESSING "TI2":  ion temperature eV    --------------------
 _%UF2GET FALLBACK:  1D UFILE INPUT => TIME INVARIANT PROFILE
 %SETDAT2-- X axis is normalized flux, not modified, npts= 20

 *DDEFIN: Set Plasma Heating parameters :-    ==========================
  
  -> entering setnbi (neutral beam powers, voltages, etc.)
  ...setting NBI powers & voltages from namelist.
     NBI powers not stored in trdat output buffer.
  Zeff fixed in time and space: 
    Zeff data only found in namelist.
 %SETDFLT:  "DTG" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DTMAXG =  5.0000E-03
  %setmisc -- time dependent geometry timestep enabled (ZOOM is off).
 %SETDFLT:  "DTS" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES =  5.0000E-04
  %setmisc -- time dependent source timestep enabled (ZOOM is off).
 %SETDFLT:  "DTX" INPUT DATA FILE NOT SPECIFIED
 ==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT =  1.0000E-02
  %setmisc -- time dependent output timestep enabled (ZOOM is off).
 %TDB_EXECSYM:  PRESYMMETRIZE THE "TER" DATA
 WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
 WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
  --------------------------------------------------
  %trdat_bdy_check -- checking plasma boundary data
  
  trdat_bdy_check: OK
  ...min(r_curvature/(Rmax-Rmin)) is:    4.8270035059017634E-002
  ...at time t=   4.8600000000000011E-002  seconds.
  

 ------------> thermal ion ptcl balance summary:

  Hydrogen  NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO             
  Deuterium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO             
  Tritium   (absent)                                         
  Helium-3  (absent)                                         
  Helium-4  (absent)                                         
  Lithium-6 (absent)                                         

 Recycling fractions RFRAC are specified.

 ------------------------------------
  Fast ion summary:
  
  Beam species: D
  Fusion product species: He4
  Minority RF species: (None)
 ------------------------------------
  (mpi_share_env) process myid=           0  cwd: /scratch/shared/kaye/transp_compute/ST40/14577A20
==========(runtrx_new TRDAT sts = 0)======
==>runtrx_new:  trdat execution successful
            will write to mdsplus later
==========LABEL execution===============
date:  Wed Feb 4 03:04:55 PM EST 2026 ( flux-node15.local )
==>runtrx_new:  label execution successful
==========add TF.PLN to MDSplus ========
==========(runtrx_new)======================
date:  Wed Feb 4 03:04:55 PM EST 2026 ( flux-node15.local )

 ************************************************************************
 Program: mds_start
 Version: v0.3.3
 Revision: dcd1458
 Date: 06/06/2025
 ************************************************************************
 mds_conopn: option =           4   145770120  TRANSP_ST40             
  ...connecting to server:  TRANSPGRID.PPPL.GOV
 ...tcl("EDIT TRANSP_ST40/SHOT=145770120")
 ?mds_add_node: already there CONTENTS
 nid =           1
 open 14577A20TF.PLN                                                                                                                                                                                                                                  
  add_file:         6930  lines -          63
 tcl("WRITE")
 stat =           1
==========add PH.CDF to MDSplus ========
==========(runtrx_new)======================
date:  Wed Feb 4 03:04:56 PM EST 2026 ( flux-node15.local )
==>runtrx_new: LINK_ON_HOST environment variable detected.
==========(runtrx_new)======================
==========>runtrx_new normal exit<==========
date:  Wed Feb 4 03:04:56 PM EST 2026 ( flux-node15.local )