TRANSP Grid Analysis 205021S07 NSTU trdat.log
==>runtrx_r9 start: date: Wed Apr 1 11:17:19 AM EDT 2026 ( flux-login1.pppl.gov )
argv = 2
iarg = 2
cmd_opt = pre
runtrx_r9: tok.yy = NSTU.16
==========(runtrx_r9)======================
date: Wed Apr 1 11:17:19 AM EDT 2026 ( flux-login1.pppl.gov )
args: 205021S07 pre
==========(runtrx_r9)======================
==========(runtrx_r9)======================
==========TRANSP preprocessing==========
date: Wed Apr 1 11:17:19 AM EDT 2026 ( flux-login1.pppl.gov )
==========check for 205021S07_mdsmark.sh===
==========(runtrx_r9)======================
==========TRDAT execution===============
date: Wed Apr 1 11:17:19 AM EDT 2026 ( flux-login1.pppl.gov )
TRDAT
TRANSP Version: 21.X
TRANSP DOI: 10.11578/dc.20180627.4
Build Date: 2021/--/--
%trmpi_init.f90: LOG_LEVEL env. var.: 1
%trmpi_init.f90: logfile_level: warn
CTOKNM : Cdir = /scratch/shared/tr_mscottod/transp_compute/NSTU/205021S07/
% DIRECTORY IS /scratch/shared/tr_mscottod/transp_compute/NSTU/205021S07/; TOKAMAK ID SET TO NSTU
%trmpi_openlog: LOGFILE_LEVEL = warn
namelist element value field(s): decimal point(s) inserted:
GOOMAX
%NLIST: open namelist file205021S07TR.ZDA
%trcom_static_box: loading static data
%mds_setup: setting MDSplus server to: TRANSPGRID.PPPL.GOV
%mds_setup: server set OK.
%mds_setup: MDSplus opening tree: TRANSP_NSTU 2050211907
%mds_setup: MDSplus tree open status: 265389633
-----------> entering UF0GET.
%UF0DRD: DIMENSIONALITY OF INPUT FILE = 2
% NO. OF BEAMS (NB2 DATA) = 6
%UF0DRD: DIMENSIONALITY OF INPUT FILE = 3
UF0GET: -> Btor is clockwise from BTOR_CCW scalar in RFS data.
UF0GET: -> Itor is counter-clockwise from ITOR_CCW scalar in RFS data.
%UF0GET -- finished.
%DATCHK: full equilibrium input
DATCHK: CHECKING ARRAY DIMENSIONS, SWITCHES, ETC
%TIME DEPENDENT FAST ION ANOM. DIFFUSION CONTROLS DETECTED!
%ENERGY DEPENDENT FAST ION ANOM. DIFFUSION CONTROLS DETECTED!
%DATCHK -- VALUE OF FRAC TOO SMALL, RESET.
%DATCHK: NYXINV incremented to be odd: 101 161
%DATCHK: no ECH/ECCD, NLECH=F,
%DATCHK: no Lower Hybrid, NLLH=F
TIDXSW defaulted: value of 0.05 assigned.
%DATCKA: ACfile times pre-screen...
%DATCKA -- CHECKING NON-DEFAULT SPECIFICATIONS FOR AC FILE I/O
GIVEN IN NAMELIST CHARACTER DATA ARRAYS "SELOUT" AND "SELAVG"
%ASCXFIN -- AC FILE OPERATION COMPLETED SUCCESSFULLY.
dummy trdatusub vsn trgdat_check called (OK).
dummy trdatusub vsn trgdat_psload called (OK).
*UTRCHK: CHECKING TRDAT NAMELIST SPECIFICATIONS.
%UTRCHK: full equilibrium input
%UTRCHK warning: NO TOROIDAL ROTATION DATA & NLVPHI=.TRUE.
_UTRCHK- ROTATION DATA TRIGRAPHS: VPH VP2 OMG
*DDEFIN: SET UP PHYSICS DATA FOR ANALYSIS:
TIME RANGE IS TINIT= 3.1431E-02, FTIME= 1.2389E+00 SECONDS.
SETSCD - SET SCALAR DATA FOR UPF
SETTIM - SET UP TIMING INFORMATION FOR UPF
*UF1GET: PROCESSING "CUR": plasma current amps -------------------
*UF1GET: PROCESSING "RBZ": [ext. B field] * R Tesla*cm -----------
%SETDFLT: "GAS" INPUT DATA FILE NOT SPECIFIED
==>DEFAULT VALUE SUBSTITUTED, GASFLN = 0.0000E+00
*UF1GET: PROCESSING "NTX": Neutron flux n/sec --------------------
*UF1GET: PROCESSING "PLF": Poloidal flux Wb/rad ------------------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
*UF1GET: PROCESSING "TRF": Toroidal flux Webers ------------------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
*UF1GET: PROCESSING "VSF": surface voltage volts -----------------
*UF3GET: PROCESSING "RFS": R(theta,xi) cm ------------------------
*UF3GET: PROCESSING "ZFS": Z(theta,xi) cm ------------------------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
%Geteq: RFS file does not cover time range of run;
equilibrium geometry will be extrapolated
flat to fill the time range
---> Geteq: TRANSP will use #moments NMOM = 64
Geteq: Interpolate equilibrium data for UPF
SETLIM - SET UP Axisymmetric limiter data for UPF
*UF1GET: PROCESSING "LIM": Axisymmetric Limiter cm ---------------
%UF1GET: X axis is not the timebase, processing axis units cm
%FIXUNS: CONVERTING UFILE LIM TIMEBASE UNITS, M , TO cm
>CONVERSION FACTOR: * 100.000
%FIXUNS: CONVERTING UFILE LIM DATA UNITS, M , TO cm
>CONVERSION FACTOR: * 100.000
*UF2GET: PROCESSING "GRB": MHD g (R*Bt) profile Tesla*cm ---------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
%SETDAT2-- X axis is normalized flux, not modified, npts= 41
*UF2GET: PROCESSING "NER": electron density n/cm**3 --------------
%CKSETRD: NRINER=3 DATA: PLASMA COVERAGE CHECK:
GREATEST LOWER BOUND (*) (R-R0)/A = -8.4832E-01
LEAST UPPER BOUND (*) (R-R0)/A = 9.8381E-01
*EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A =
-9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS.
*REQUIREMENT RELAXED BY NAMELIST: XRCNER= 1.000E+00 RMJCHK=-1.000E+00
%SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA
*UF2GET: PROCESSING "PRS": MHD Pressure profile Pascals ----------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
%SETDAT2-- X axis is normalized flux, not modified, npts= 41
*UF2GET: PROCESSING "QPR": q profile ---------------------------
%CHKTIM: DATA TIME RANGE 4.6000E-02 TO 1.2430E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
%SETDAT2-- X axis is normalized flux, not modified, npts= 41
*UF2GET: PROCESSING "TER": electron temperature eV ---------------
%CKSETRD: NRITER=3 DATA: PLASMA COVERAGE CHECK:
GREATEST LOWER BOUND (*) (R-R0)/A = -8.4832E-01
LEAST UPPER BOUND (*) (R-R0)/A = 9.8381E-01
*EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A =
-9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS.
*REQUIREMENT RELAXED BY NAMELIST: XRCTER= 1.000E+00 RMJCHK=-1.000E+00
%SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA
*UF2GET: PROCESSING "TI2": ion temperature eV --------------------
%CHKTIM: DATA TIME RANGE 1.6300E-02 TO 1.2389E+00 SECONDS
DOES NOT COVER THE ENTIRE ANALYSIS TIME RANGE (TINIT,FTIME).
%CKSETRD: NRITI2=3 DATA: PLASMA COVERAGE CHECK:
GREATEST LOWER BOUND (*) (R-R0)/A = -1.5060E+00
LEAST UPPER BOUND (*) (R-R0)/A = -6.6601E-01
*EXPECTED MINIMUM COVERAGE TO INCLUDE RANGE (R-R0)/A =
-9.0000E-01 TO 9.0000E-01 AT ALL TIMES IN THE ANALYSIS.
*REQUIREMENT RELAXED BY NAMELIST: XRCTI2= 1.000E+00 RMJCHK=-1.000E+00
%SETRD0: X VECTOR SET FROM UFILE *2-SIDED* MAJOR RADIUS DATA
*DDEFIN: Set Plasma Heating parameters :- ==========================
-> entering setnbi (neutral beam powers, voltages, etc.)
SETNBI - SET UP NEUTRAL BEAM DATA FOR UPF
*UF2GET: PROCESSING "NB2": beam heating data -------------------
%UF2GET -- INPUT UFILE AXES OUT OF ORDER, WILL SWAP:
1ST DIMENSION = " -"; 2ND DIMENSION = " s"
%SETNBI- BEAM FULL ENERGY FRACTIONS SET BY NBI FILE **
%SETNBI- BEAM HALF ENERGY FRACTIONS SET BY NBI FILE **
%setnbi: NBI on/off times taken from data.
%NB_ONOFF: NBI on/off times (s): 2.0135E-01 9.5065E-01
SET_FREEBDY - SET UP POLOIDAL FIELD COIL CURRENTS
*UF2GET: PROCESSING "PFC": PFC currents A ------------------------
Zeff fixed in time and space:
Zeff data only found in namelist.
%SETDFLT: "DTG" INPUT DATA FILE NOT SPECIFIED
==>DEFAULT VALUE SUBSTITUTED, DTMAXG = 5.0000E-03
%setmisc -- time dependent geometry timestep enabled (ZOOM is off).
%SETDFLT: "DTS" INPUT DATA FILE NOT SPECIFIED
==>DEFAULT VALUE SUBSTITUTED, DT_SOURCES = 5.0000E-03
%setmisc -- time dependent source timestep enabled (ZOOM is off).
%SETDFLT: "DTX" INPUT DATA FILE NOT SPECIFIED
==>DEFAULT VALUE SUBSTITUTED, DT_OUTPUT = 1.0000E-03
%setmisc -- time dependent output timestep enabled (ZOOM is off).
%TDB_EXECSYM: PRESYMMETRIZE THE "TER" DATA
WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
WARNING - HOLLOW DATA PROFILE DETECTED SR TDB_PRFINV
%TDB_EXECSYM: PRESYMMETRIZE THE "TI2" DATA
--------------------------------------------------
%trdat_bdy_check -- checking plasma boundary data
trdat_bdy_check: OK
...min(r_curvature/(Rmax-Rmin)) is: 5.6070058670275022E-002
...at time t= 0.56243072068690037 seconds.
------------> thermal ion ptcl balance summary:
Hydrogen NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO
Deuterium NDEFINE=0 NMODEL=1 RC=Tau(p) GF=ZERO
Tritium (absent)
Helium-3 (absent)
(mpi_share_env) process myid= 0 cwd: /scratch/shared/tr_mscottod/transp_compute/NSTU/205021S07
In TRDAT: calling COPY_PTNML
Helium-4 (absent)
Lithium-6 (absent)
Recycling fractions RFRAC are specified.
------------------------------------
Fast ion summary:
Beam species: D
Fusion product species: (None)
Minority RF species: (None)
------------------------------------
COPY_PTNML_SUB: namelist: pt_template= "/p/transpusers/mscottod/NSTU/205021S07/205021/pt_inp.nml"
COPY_PTNML_SUB: PT_SOLVER namelist file=
/p/transpusers/mscottod/NSTU/205021S07/205021/pt_inp.nml
COPY_PTNML_SUB: zcmd= cp /p/transpusers/mscottod/NSTU/205021S07/205021/pt_inp.nml ./205021S07_pt.nml
In TRDAT: calling COPY_MMMNML
COPY_PTNML_SUB: file copy status (0 is normal): 0
COPY_MMM_SUB: namelist: mmm_template= "/p/transpusers/mscottod/NSTU/205021S07/205021/mmm_inp.nml"
COPY_MMM_SUB: MMM namelist file=
/p/transpusers/mscottod/NSTU/205021S07/205021/mmm_inp.nml
COPY_MMM_SUB: zcmd= cp /p/transpusers/mscottod/NSTU/205021S07/205021/mmm_inp.nml ./205021S07_mmm.nml
COPY_MMM_SUB: file copy status (0 is normal): 0
==========(runtrx_r9 TRDAT sts = 0)======
==>runtrx_r9: trdat execution successful
will write to mdsplus later
==========LABEL execution===============
date: Wed Apr 1 11:17:23 AM EDT 2026 ( flux-login1.pppl.gov )
==>runtrx_r9: label execution successful
==========add TF.PLN to MDSplus ========
==========(runtrx_r9)======================
date: Wed Apr 1 11:17:23 AM EDT 2026 ( flux-login1.pppl.gov )
************************************************************************
Program: mds_start
Version: v0.6.0
Revision: 673c23d
Date: 02/11/2026
************************************************************************
mds_conopn: option = 4 2050211907 TRANSP_NSTU
...connecting to server: TRANSPGRID.PPPL.GOV
...tcl("EDIT TRANSP_NSTU/SHOT=2050211907")
nid = 1
open 205021S07TF.PLN
add_file: 8089 lines - 63
tcl("WRITE")
stat = 1
chmod: changing permissions of '/p/transpgrid/mds_trees/transp_nstu/transp_nstu_2050211907.tree': Operation not permitted
==========add PH.CDF to MDSplus ========
==========(runtrx_r9)======================
date: Wed Apr 1 11:17:23 AM EDT 2026 ( flux-login1.pppl.gov )
==>runtrx_r9: LINK_ON_HOST environment variable detected.
==========(runtrx_r9)======================
==========>runtrx_r9 normal exit<==========
date: Wed Apr 1 11:17:23 AM EDT 2026 ( flux-login1.pppl.gov )